Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 INE1-201ENST00000456273 945 ntBASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CR383656.12-201ENST00000549567 513 ntBASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 RN7SL48P-201ENST00000579283 293 ntBASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 AL022328.1-201ENST00000610050 478 ntBASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRFBP1Q8NEF9 AC023090.2-201ENST00000625182 2110 ntBASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 NME2P1-201ENST00000426182 414 ntBASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 TTTY23B-201ENST00000442790 549 ntBASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AP005018.1-201ENST00000525475 301 ntBASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AC145423.3-201ENST00000615987 467 ntBASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AC132938.4-201ENST00000623835 848 ntBASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 AC018442.1-201ENST00000421439 2061 ntBASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.36□□□□□ -0.11
SRFBP1Q8NEF9 CICP23-201ENST00000605013 2741 ntBASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms