Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC006033.1-201ENST00000440505 426 ntBASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC073413.1-201ENST00000603927 732 ntBASIC15.31■□□□□ 0.04
KDM1BQ8NB78 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AL023775.1-201ENST00000454907 1746 ntBASIC15.31■□□□□ 0.04
KDM1BQ8NB78 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC005912.2-201ENST00000619492 2400 ntBASIC15.31■□□□□ 0.04
KDM1BQ8NB78 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 MIR663B-201ENST00000408361 115 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 CHMP1AP1-201ENST00000445563 662 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AL391280.1-201ENST00000506969 1062 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AP003171.2-201ENST00000528208 925 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AP006547.1-201ENST00000563435 692 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 PPY2P-201ENST00000582808 702 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 MIR6787-201ENST00000616675 61 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 AL157414.3-201ENST00000624276 1954 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.3■□□□□ 0.04
KDM1BQ8NB78 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KDM1BQ8NB78 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 WASH3P-207ENST00000560956 1394 ntBASIC15.29■□□□□ 0.04
KDM1BQ8NB78 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDM1BQ8NB78 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms