Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 RPL13AP20-201ENST00000459725 609 ntBASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 AC023824.1-201ENST00000562945 2975 ntBASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 TUBB1P2-201ENST00000422712 1306 ntBASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 TUBB1P1-201ENST00000503144 1300 ntBASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 AL136379.1-201ENST00000623471 2642 ntBASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 FAM86HP-204ENST00000513466 959 ntBASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 REXO1L6P-201ENST00000603433 1515 ntBASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.79□□□□□ -0.2
C9orf40Q8IXQ3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 AC068418.2-201ENST00000577309 3703 ntBASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 Z93015.1-201ENST00000451718 390 ntBASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 ALG3P1-201ENST00000508806 1114 ntBASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 AP001002.3-201ENST00000623482 206 ntBASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf40Q8IXQ3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms