Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 HSPB1P2-201ENST00000448722 546 ntBASIC17.79■□□□□ 0.44
CTR9Q6PD62 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 MIR4525-201ENST00000580000 75 ntBASIC17.79■□□□□ 0.44
CTR9Q6PD62 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 AC244157.2-201ENST00000616239 1006 ntBASIC17.79■□□□□ 0.44
CTR9Q6PD62 AP001002.3-201ENST00000623482 206 ntBASIC17.79■□□□□ 0.44
CTR9Q6PD62 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTR9Q6PD62 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.79■□□□□ 0.44
CTR9Q6PD62 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 AC079178.1-201ENST00000420915 656 ntBASIC17.78■□□□□ 0.44
CTR9Q6PD62 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 ZNF767P-206ENST00000513792 565 ntBASIC17.78■□□□□ 0.44
CTR9Q6PD62 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.78■□□□□ 0.44
CTR9Q6PD62 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTR9Q6PD62 AC067930.6-201ENST00000623257 4947 ntBASIC17.77■□□□□ 0.44
CTR9Q6PD62 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.77■□□□□ 0.44
CTR9Q6PD62 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTR9Q6PD62 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms