Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 AC097493.3-201ENST00000509725 367 ntBASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 DUX4L27-201ENST00000554796 1261 ntBASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 AC067750.1-201ENST00000608826 6545 ntBASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 BEND3P3-201ENST00000611030 2440 ntBASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 AC241585.1-201ENST00000433527 519 ntBASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 AL512638.1-201ENST00000457493 794 ntBASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM53Q6P2H8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms