Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 RNA5SP406-201ENST00000516106 112 ntBASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 HERC2P11-201ENST00000562845 725 ntBASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AC100756.2-201ENST00000569537 736 ntBASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AL160191.2-201ENST00000603975 601 ntBASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 NHP2-202ENST00000314397 599 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AC095040.1-201ENST00000513286 675 ntBASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AP005264.6-204ENST00000588436 719 ntBASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 HPX-213ENST00000615166 826 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 SURF4-203ENST00000371991 715 ntTSL 3 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 KRT8P1-201ENST00000557533 1207 ntBASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13DQ5THJ4 AC138035.3-201ENST00000622706 2791 ntBASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 KRT18P46-201ENST00000435568 1279 ntBASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 MVK-217ENST00000639206 367 ntTSL 5 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 AC232323.1-201ENST00000540724 2099 ntBASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13DQ5THJ4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC9.71□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms