Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 MEP1AP4-201ENST00000423244 1087 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 TSPY16P-201ENST00000449843 468 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 PTENP1-202ENST00000532280 3996 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CICP11-201ENST00000434745 2827 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 AC087386.2-201ENST00000623212 4637 ntBASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATPAF1Q5TC12 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 AC018529.2-202ENST00000611482 3087 ntBASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 RPL5P21-201ENST00000404620 815 ntBASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 KRT18P64-201ENST00000434946 1219 ntBASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 UGT1A2P-201ENST00000454886 866 ntBASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms