Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCN7AQ01118 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCN7AQ01118 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SCN7AQ01118 BCAS2P2-201ENST00000425064 674 ntBASIC18.12■□□□□ 0.49
SCN7AQ01118 KRT8P2-201ENST00000556193 944 ntBASIC18.12■□□□□ 0.49
SCN7AQ01118 AC244250.3-201ENST00000620749 366 ntBASIC18.12■□□□□ 0.49
SCN7AQ01118 AC067931.2-201ENST00000623655 2003 ntBASIC18.12■□□□□ 0.49
SCN7AQ01118 AC138466.4-201ENST00000623965 852 ntBASIC18.12■□□□□ 0.49
SCN7AQ01118 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.12■□□□□ 0.49
SCN7AQ01118 LINC00431-202ENST00000636375 159 ntBASIC18.12■□□□□ 0.49
SCN7AQ01118 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SCN7AQ01118 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCN7AQ01118 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
SCN7AQ01118 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SCN7AQ01118 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.11■□□□□ 0.49
SCN7AQ01118 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN7AQ01118 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN7AQ01118 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SCN7AQ01118 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN7AQ01118 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.11■□□□□ 0.49
SCN7AQ01118 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.11■□□□□ 0.49
SCN7AQ01118 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.11■□□□□ 0.49
SCN7AQ01118 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.11■□□□□ 0.49
SCN7AQ01118 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.11■□□□□ 0.49
SCN7AQ01118 AL161932.2-201ENST00000435436 679 ntBASIC18.11■□□□□ 0.49
SCN7AQ01118 AC093909.3-201ENST00000504783 336 ntBASIC18.11■□□□□ 0.49
SCN7AQ01118 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN7AQ01118 HERC2P11-201ENST00000562845 725 ntBASIC18.11■□□□□ 0.49
SCN7AQ01118 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.11■□□□□ 0.49
SCN7AQ01118 AC100756.2-201ENST00000569537 736 ntBASIC18.11■□□□□ 0.49
SCN7AQ01118 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.11■□□□□ 0.49
SCN7AQ01118 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.11■□□□□ 0.49
SCN7AQ01118 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN7AQ01118 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SCN7AQ01118 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SCN7AQ01118 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SCN7AQ01118 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 AC013268.4-201ENST00000637413 2228 ntBASIC18.11■□□□□ 0.49
SCN7AQ01118 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 AC006372.4-201ENST00000624122 1543 ntBASIC18.11■□□□□ 0.49
SCN7AQ01118 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.11■□□□□ 0.49
SCN7AQ01118 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCN7AQ01118 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.1■□□□□ 0.49
SCN7AQ01118 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SCN7AQ01118 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.1■□□□□ 0.49
SCN7AQ01118 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.1■□□□□ 0.49
SCN7AQ01118 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.1■□□□□ 0.49
SCN7AQ01118 AC234644.1-201ENST00000406065 370 ntBASIC18.1■□□□□ 0.49
SCN7AQ01118 RPL3P2-204ENST00000413027 1203 ntBASIC18.1■□□□□ 0.49
SCN7AQ01118 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.1■□□□□ 0.49
SCN7AQ01118 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.1■□□□□ 0.49
SCN7AQ01118 AC006158.1-201ENST00000610661 249 ntBASIC18.1■□□□□ 0.49
SCN7AQ01118 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SCN7AQ01118 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SCN7AQ01118 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SCN7AQ01118 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.1■□□□□ 0.49
SCN7AQ01118 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.1■□□□□ 0.49
SCN7AQ01118 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.1■□□□□ 0.49
SCN7AQ01118 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.1■□□□□ 0.49
SCN7AQ01118 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SCN7AQ01118 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN7AQ01118 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN7AQ01118 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN7AQ01118 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN7AQ01118 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN7AQ01118 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.09■□□□□ 0.49
SCN7AQ01118 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCN7AQ01118 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCN7AQ01118 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.09■□□□□ 0.49
SCN7AQ01118 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.09■□□□□ 0.49
SCN7AQ01118 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.09■□□□□ 0.49
SCN7AQ01118 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.09■□□□□ 0.49
SCN7AQ01118 AL118516.1-201ENST00000564152 670 ntBASIC18.09■□□□□ 0.49
SCN7AQ01118 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.09■□□□□ 0.49
SCN7AQ01118 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms