Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHMP4BP1P59074 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP4BP1P59074 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHMP4BP1P59074 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP4BP1P59074 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP4BP1P59074 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP4BP1P59074 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP4BP1P59074 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 GRK6P1-201ENST00000400595 1711 ntBASIC17.22■□□□□ 0.35
CHMP4BP1P59074 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 AC090616.6-203ENST00000579186 1945 ntBASIC17.22■□□□□ 0.35
CHMP4BP1P59074 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 GPAA1P2-201ENST00000417923 928 ntBASIC17.22■□□□□ 0.35
CHMP4BP1P59074 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 FAM86HP-204ENST00000513466 959 ntBASIC17.22■□□□□ 0.35
CHMP4BP1P59074 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 C2orf69P2-201ENST00000562032 1123 ntBASIC17.22■□□□□ 0.35
CHMP4BP1P59074 DUX4L45-201ENST00000566406 1057 ntBASIC17.22■□□□□ 0.35
CHMP4BP1P59074 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 AC025181.2-201ENST00000606994 802 ntBASIC17.22■□□□□ 0.35
CHMP4BP1P59074 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 LINC00552-201ENST00000625151 2579 ntBASIC17.22■□□□□ 0.35
CHMP4BP1P59074 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP4BP1P59074 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 AL354989.2-201ENST00000435838 1540 ntBASIC17.21■□□□□ 0.35
CHMP4BP1P59074 LRRC59-203ENST00000576448 1531 ntBASIC17.21■□□□□ 0.35
CHMP4BP1P59074 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 BTBD6P1-201ENST00000412176 1267 ntBASIC17.21■□□□□ 0.35
CHMP4BP1P59074 KLF2P2-201ENST00000416807 1039 ntBASIC17.21■□□□□ 0.35
CHMP4BP1P59074 AC007969.1-201ENST00000433675 447 ntBASIC17.21■□□□□ 0.35
CHMP4BP1P59074 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 GOLGA2P4-201ENST00000441462 777 ntBASIC17.21■□□□□ 0.35
CHMP4BP1P59074 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 AL022328.3-201ENST00000607943 679 ntBASIC17.21■□□□□ 0.35
CHMP4BP1P59074 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP4BP1P59074 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms