Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.09□□□□□ -0.15
CDH15P55291 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDH15P55291 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CDH15P55291 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.09□□□□□ -0.15
CDH15P55291 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CDH15P55291 GHSR-202ENST00000427970 912 ntBASIC14.09□□□□□ -0.15
CDH15P55291 ADH5P3-201ENST00000433842 1137 ntBASIC14.09□□□□□ -0.15
CDH15P55291 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.09□□□□□ -0.15
CDH15P55291 TPT1P11-201ENST00000458482 498 ntBASIC14.09□□□□□ -0.15
CDH15P55291 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.09□□□□□ -0.15
CDH15P55291 HLA-J-203ENST00000494367 1087 ntBASIC14.09□□□□□ -0.15
CDH15P55291 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.09□□□□□ -0.15
CDH15P55291 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.09□□□□□ -0.15
CDH15P55291 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.09□□□□□ -0.15
CDH15P55291 AC025678.2-201ENST00000562061 970 ntBASIC14.09□□□□□ -0.15
CDH15P55291 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.09□□□□□ -0.15
CDH15P55291 AC097359.3-201ENST00000603982 1210 ntBASIC14.09□□□□□ -0.15
CDH15P55291 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDH15P55291 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.09□□□□□ -0.15
CDH15P55291 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDH15P55291 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.09□□□□□ -0.15
CDH15P55291 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 KRT8P24-201ENST00000560290 1559 ntBASIC14.09□□□□□ -0.15
CDH15P55291 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH15P55291 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH15P55291 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.15
CDH15P55291 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH15P55291 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH15P55291 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH15P55291 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
CDH15P55291 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH15P55291 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CDH15P55291 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDH15P55291 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH15P55291 AC114271.1-201ENST00000612689 2813 ntBASIC14.08□□□□□ -0.16
CDH15P55291 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH15P55291 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CDH15P55291 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDH15P55291 AC004987.2-201ENST00000395959 1148 ntBASIC14.08□□□□□ -0.16
CDH15P55291 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.08□□□□□ -0.16
CDH15P55291 AL355306.1-201ENST00000415580 579 ntBASIC14.08□□□□□ -0.16
CDH15P55291 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.08□□□□□ -0.16
CDH15P55291 AC140658.5-201ENST00000438532 169 ntBASIC14.08□□□□□ -0.16
CDH15P55291 TIMM8BP1-201ENST00000452384 211 ntBASIC14.08□□□□□ -0.16
CDH15P55291 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH15P55291 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH15P55291 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.08□□□□□ -0.16
CDH15P55291 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
CDH15P55291 HNRNPUP1-201ENST00000554987 333 ntBASIC14.08□□□□□ -0.16
CDH15P55291 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 AC092364.2-202ENST00000597012 1073 ntBASIC14.08□□□□□ -0.16
CDH15P55291 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CDH15P55291 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 AC026120.1-201ENST00000611536 926 ntBASIC14.08□□□□□ -0.16
CDH15P55291 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDH15P55291 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
CDH15P55291 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH15P55291 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CDH15P55291 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH15P55291 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms