Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATF3P18847 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 PCDHB19P-201ENST00000570871 2371 ntBASIC20.17■□□□□ 0.82
ATF3P18847 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC20.17■□□□□ 0.82
ATF3P18847 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.17■□□□□ 0.82
ATF3P18847 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 PYY2-201ENST00000315776 282 ntBASIC20.17■□□□□ 0.82
ATF3P18847 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 AC108734.2-201ENST00000420887 1069 ntBASIC20.17■□□□□ 0.82
ATF3P18847 HLA-DPA2-205ENST00000433582 733 ntBASIC20.17■□□□□ 0.82
ATF3P18847 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 GDNF-207ENST00000515058 764 ntTSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC20.17■□□□□ 0.82
ATF3P18847 GOLGA2P7-209ENST00000560408 745 ntBASIC20.17■□□□□ 0.82
ATF3P18847 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 LINC00244-201ENST00000625073 613 ntBASIC20.17■□□□□ 0.82
ATF3P18847 ST5-261ENST00000626808 1071 ntTSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 AL136172.1-201ENST00000598590 1394 ntBASIC20.17■□□□□ 0.82
ATF3P18847 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.17■□□□□ 0.82
ATF3P18847 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ATF3P18847 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATF3P18847 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.16■□□□□ 0.82
ATF3P18847 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATF3P18847 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.16■□□□□ 0.82
ATF3P18847 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATF3P18847 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC20.16■□□□□ 0.82
ATF3P18847 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC20.16■□□□□ 0.82
ATF3P18847 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC20.16■□□□□ 0.82
ATF3P18847 SRP14-204ENST00000558720 780 ntTSL 2 BASIC20.16■□□□□ 0.82
ATF3P18847 AC021016.3-201ENST00000608367 477 ntBASIC20.16■□□□□ 0.82
ATF3P18847 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
ATF3P18847 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
ATF3P18847 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ATF3P18847 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.16■□□□□ 0.82
ATF3P18847 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.16■□□□□ 0.82
ATF3P18847 AC009093.10-201ENST00000641956 1442 ntBASIC20.16■□□□□ 0.82
ATF3P18847 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ATF3P18847 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC20.16■□□□□ 0.82
ATF3P18847 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.16■□□□□ 0.82
ATF3P18847 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATF3P18847 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATF3P18847 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC20.15■□□□□ 0.82
ATF3P18847 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATF3P18847 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATF3P18847 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
ATF3P18847 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.15■□□□□ 0.82
ATF3P18847 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATF3P18847 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATF3P18847 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC20.15■□□□□ 0.82
ATF3P18847 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC20.15■□□□□ 0.82
ATF3P18847 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.15■□□□□ 0.82
ATF3P18847 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC20.15■□□□□ 0.82
ATF3P18847 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.15■□□□□ 0.82
ATF3P18847 AC106047.2-201ENST00000511723 743 ntBASIC20.15■□□□□ 0.82
ATF3P18847 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC20.15■□□□□ 0.82
ATF3P18847 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ATF3P18847 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC20.15■□□□□ 0.82
ATF3P18847 CYP4F36P-201ENST00000589193 186 ntBASIC20.15■□□□□ 0.82
ATF3P18847 MIR6816-201ENST00000620368 66 ntBASIC20.15■□□□□ 0.82
ATF3P18847 ENPP7P8-202ENST00000527856 1345 ntBASIC20.15■□□□□ 0.82
ATF3P18847 KRT8P28-201ENST00000433288 1390 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms