Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
PTPN1P18031 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.86■□□□□ 0.13
PTPN1P18031 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PTPN1P18031 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN1P18031 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 HIST2H2BB-201ENST00000449108 381 ntBASIC15.86■□□□□ 0.13
PTPN1P18031 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN1P18031 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PTPN1P18031 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN1P18031 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN1P18031 MIR6799-201ENST00000620297 69 ntBASIC15.86■□□□□ 0.13
PTPN1P18031 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.86■□□□□ 0.13
PTPN1P18031 AC002472.3-201ENST00000640124 621 ntBASIC15.86■□□□□ 0.13
PTPN1P18031 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN1P18031 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PTPN1P18031 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
PTPN1P18031 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PTPN1P18031 LINC01101-201ENST00000622953 1884 ntBASIC15.86■□□□□ 0.13
PTPN1P18031 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN1P18031 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN1P18031 CICP23-201ENST00000605013 2741 ntBASIC15.86■□□□□ 0.13
PTPN1P18031 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN1P18031 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PTPN1P18031 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PTPN1P18031 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PTPN1P18031 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN1P18031 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN1P18031 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 FAM86MP-201ENST00000340703 885 ntBASIC15.85■□□□□ 0.13
PTPN1P18031 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN1P18031 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 BTBD6P1-201ENST00000412176 1267 ntBASIC15.85■□□□□ 0.13
PTPN1P18031 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN1P18031 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 RPSAP36-202ENST00000494591 1261 ntBASIC15.85■□□□□ 0.13
PTPN1P18031 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN1P18031 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN1P18031 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
PTPN1P18031 RN7SL219P-201ENST00000582872 296 ntBASIC15.85■□□□□ 0.13
PTPN1P18031 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN1P18031 AL358472.3-201ENST00000608147 415 ntBASIC15.85■□□□□ 0.13
PTPN1P18031 AC244157.2-201ENST00000616239 1006 ntBASIC15.85■□□□□ 0.13
PTPN1P18031 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN1P18031 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN1P18031 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 AC006058.4-201ENST00000624016 1670 ntBASIC15.85■□□□□ 0.13
PTPN1P18031 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PTPN1P18031 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN1P18031 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN1P18031 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN1P18031 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN1P18031 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN1P18031 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN1P18031 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 AC079178.1-201ENST00000420915 656 ntBASIC15.84■□□□□ 0.13
PTPN1P18031 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.84■□□□□ 0.13
PTPN1P18031 MTX1P1-201ENST00000440904 838 ntBASIC15.84■□□□□ 0.13
PTPN1P18031 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.84■□□□□ 0.13
PTPN1P18031 AC100850.1-201ENST00000506768 649 ntBASIC15.84■□□□□ 0.13
PTPN1P18031 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PTPN1P18031 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN1P18031 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.84■□□□□ 0.13
PTPN1P18031 MIR4538-201ENST00000581377 78 ntBASIC15.84■□□□□ 0.13
PTPN1P18031 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN1P18031 AC091271.1-201ENST00000611877 1162 ntBASIC15.84■□□□□ 0.13
PTPN1P18031 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN1P18031 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN1P18031 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PTPN1P18031 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms