Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 MYO15B-237ENST00000642007 4893 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 AC006001.1-201ENST00000325130 474 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 ANKRD19P-201ENST00000338192 862 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 BOLA2P3-201ENST00000404566 256 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 ACA64.2-201ENST00000459014 129 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 AP000812.2-201ENST00000538934 718 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 SNX29P1-201ENST00000548357 1007 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 OR10B1P-201ENST00000601666 907 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.11■□□□□ 0.17
HLA-DRAP01903 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DRAP01903 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DRAP01903 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 AC099063.4-201ENST00000641099 1602 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 CD8B2-202ENST00000417670 633 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 FAM8A4P-201ENST00000435433 1213 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 CTBP2P5-201ENST00000454986 1264 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 AC131206.1-201ENST00000538078 1211 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 HILS1-202ENST00000545329 423 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 RHOXF1P1-202ENST00000635473 501 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 AC007292.2-201ENST00000593524 1812 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 AP000593.2-201ENST00000542775 1433 ntBASIC16.1■□□□□ 0.17
HLA-DRAP01903 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DRAP01903 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DRAP01903 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms