Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.42□□□□□ -0.26
CNOT4O95628 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.42□□□□□ -0.26
CNOT4O95628 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.42□□□□□ -0.26
CNOT4O95628 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.42□□□□□ -0.26
CNOT4O95628 AL355994.2-201ENST00000447882 704 ntBASIC13.42□□□□□ -0.26
CNOT4O95628 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 FTH1P14-201ENST00000482930 551 ntBASIC13.42□□□□□ -0.26
CNOT4O95628 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.42□□□□□ -0.26
CNOT4O95628 KRT90P-201ENST00000549264 1064 ntBASIC13.42□□□□□ -0.26
CNOT4O95628 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CNOT4O95628 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.42□□□□□ -0.26
CNOT4O95628 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 RHOXF1P1-202ENST00000635473 501 ntBASIC13.42□□□□□ -0.26
CNOT4O95628 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 AC148477.4-201ENST00000613430 1793 ntBASIC13.42□□□□□ -0.26
CNOT4O95628 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.42□□□□□ -0.26
CNOT4O95628 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNOT4O95628 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.42□□□□□ -0.26
CNOT4O95628 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 AC112693.3-201ENST00000624819 1983 ntBASIC13.41□□□□□ -0.26
CNOT4O95628 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CNOT4O95628 TUBB1P2-201ENST00000422712 1306 ntBASIC13.41□□□□□ -0.26
CNOT4O95628 TUBB1P1-201ENST00000503144 1300 ntBASIC13.41□□□□□ -0.26
CNOT4O95628 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.41□□□□□ -0.26
CNOT4O95628 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CNOT4O95628 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 FAM21FP-201ENST00000426241 1131 ntBASIC13.41□□□□□ -0.26
CNOT4O95628 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 RNA5SP486-201ENST00000515961 83 ntBASIC13.41□□□□□ -0.26
CNOT4O95628 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.41□□□□□ -0.26
CNOT4O95628 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.41□□□□□ -0.26
CNOT4O95628 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.41□□□□□ -0.26
CNOT4O95628 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 DUX4L47-201ENST00000566374 394 ntBASIC13.41□□□□□ -0.26
CNOT4O95628 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.41□□□□□ -0.26
CNOT4O95628 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.41□□□□□ -0.26
CNOT4O95628 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CNOT4O95628 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
CNOT4O95628 AC013268.4-201ENST00000637413 2228 ntBASIC13.41□□□□□ -0.26
CNOT4O95628 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CNOT4O95628 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNOT4O95628 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CNOT4O95628 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.4□□□□□ -0.26
CNOT4O95628 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms