Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL5O76039 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 AC003102.2-201ENST00000589195 1469 ntBASIC17.45■□□□□ 0.38
CDKL5O76039 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKL5O76039 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.45■□□□□ 0.38
CDKL5O76039 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL5O76039 TPT1P11-201ENST00000458482 498 ntBASIC17.45■□□□□ 0.38
CDKL5O76039 RN7SL837P-201ENST00000463010 287 ntBASIC17.45■□□□□ 0.38
CDKL5O76039 RN7SL692P-201ENST00000464677 288 ntBASIC17.45■□□□□ 0.38
CDKL5O76039 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKL5O76039 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKL5O76039 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKL5O76039 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKL5O76039 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.45■□□□□ 0.38
CDKL5O76039 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDKL5O76039 MIR3197-201ENST00000582241 73 ntBASIC17.45■□□□□ 0.38
CDKL5O76039 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL5O76039 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.45■□□□□ 0.38
CDKL5O76039 ENPP7P14-201ENST00000621765 1040 ntBASIC17.45■□□□□ 0.38
CDKL5O76039 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.45■□□□□ 0.38
CDKL5O76039 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL5O76039 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.45■□□□□ 0.38
CDKL5O76039 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDKL5O76039 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CDKL5O76039 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.45■□□□□ 0.38
CDKL5O76039 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.45■□□□□ 0.38
CDKL5O76039 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDKL5O76039 AC005912.2-201ENST00000619492 2400 ntBASIC17.45■□□□□ 0.38
CDKL5O76039 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDKL5O76039 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDKL5O76039 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.44■□□□□ 0.38
CDKL5O76039 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.44■□□□□ 0.38
CDKL5O76039 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CDKL5O76039 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.44■□□□□ 0.38
CDKL5O76039 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.44■□□□□ 0.38
CDKL5O76039 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.44■□□□□ 0.38
CDKL5O76039 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.44■□□□□ 0.38
CDKL5O76039 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CDKL5O76039 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.44■□□□□ 0.38
CDKL5O76039 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDKL5O76039 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDKL5O76039 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 AL009178.2-201ENST00000597278 2719 ntBASIC17.43■□□□□ 0.38
CDKL5O76039 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 AL136379.1-201ENST00000623471 2642 ntBASIC17.43■□□□□ 0.38
CDKL5O76039 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.43■□□□□ 0.38
CDKL5O76039 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.43■□□□□ 0.38
CDKL5O76039 AC005229.1-201ENST00000392885 409 ntBASIC17.43■□□□□ 0.38
CDKL5O76039 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms