Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 AC018529.2-202ENST00000611482 3087 ntBASIC15.57■□□□□ 0.08
MSI1O43347 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 AC063926.3-201ENST00000624734 5658 ntBASIC15.57■□□□□ 0.08
MSI1O43347 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MSI1O43347 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.56■□□□□ 0.08
MSI1O43347 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.56■□□□□ 0.08
MSI1O43347 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.56■□□□□ 0.08
MSI1O43347 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.56■□□□□ 0.08
MSI1O43347 MIR1908-201ENST00000410394 80 ntBASIC15.56■□□□□ 0.08
MSI1O43347 AC004945.1-201ENST00000416738 983 ntBASIC15.56■□□□□ 0.08
MSI1O43347 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.56■□□□□ 0.08
MSI1O43347 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
MSI1O43347 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
MSI1O43347 FAM86HP-204ENST00000513466 959 ntBASIC15.56■□□□□ 0.08
MSI1O43347 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.56■□□□□ 0.08
MSI1O43347 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.56■□□□□ 0.08
MSI1O43347 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.56■□□□□ 0.08
MSI1O43347 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.56■□□□□ 0.08
MSI1O43347 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.56■□□□□ 0.08
MSI1O43347 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 TUBB1P2-201ENST00000422712 1306 ntBASIC15.56■□□□□ 0.08
MSI1O43347 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.56■□□□□ 0.08
MSI1O43347 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 TUBB1P1-201ENST00000503144 1300 ntBASIC15.56■□□□□ 0.08
MSI1O43347 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.56■□□□□ 0.08
MSI1O43347 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.56■□□□□ 0.08
MSI1O43347 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
MSI1O43347 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MSI1O43347 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.56■□□□□ 0.08
MSI1O43347 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MSI1O43347 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MSI1O43347 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MSI1O43347 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.55■□□□□ 0.08
MSI1O43347 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.55■□□□□ 0.08
MSI1O43347 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.55■□□□□ 0.08
MSI1O43347 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.55■□□□□ 0.08
MSI1O43347 HIST2H2BB-201ENST00000449108 381 ntBASIC15.55■□□□□ 0.08
MSI1O43347 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.55■□□□□ 0.08
MSI1O43347 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.55■□□□□ 0.08
MSI1O43347 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.55■□□□□ 0.08
MSI1O43347 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.55■□□□□ 0.08
MSI1O43347 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.55■□□□□ 0.08
MSI1O43347 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
MSI1O43347 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms