Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1O14646 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1O14646 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1O14646 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1O14646 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1O14646 ABCD1P4-201ENST00000399687 604 ntBASIC23.26■■□□□ 1.31
CHD1O14646 BX088651.3-201ENST00000418155 352 ntBASIC23.26■■□□□ 1.31
CHD1O14646 NALT1-202ENST00000450304 437 ntTSL 3 BASIC23.26■■□□□ 1.31
CHD1O14646 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1O14646 RN7SL69P-201ENST00000468423 272 ntBASIC23.26■■□□□ 1.31
CHD1O14646 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1O14646 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1O14646 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CHD1O14646 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC23.26■■□□□ 1.31
CHD1O14646 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC23.26■■□□□ 1.31
CHD1O14646 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC23.26■■□□□ 1.31
CHD1O14646 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1O14646 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1O14646 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1O14646 LAP3P2-201ENST00000454686 1454 ntBASIC23.26■■□□□ 1.31
CHD1O14646 AL139384.1-201ENST00000612143 3047 ntBASIC23.26■■□□□ 1.31
CHD1O14646 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD1O14646 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD1O14646 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 RN7SL523P-201ENST00000484401 298 ntBASIC23.25■■□□□ 1.31
CHD1O14646 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC23.25■■□□□ 1.31
CHD1O14646 SKA2-205ENST00000580541 689 ntTSL 3 BASIC23.25■■□□□ 1.31
CHD1O14646 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC23.25■■□□□ 1.31
CHD1O14646 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 KRT8P43-201ENST00000406052 1458 ntBASIC23.25■■□□□ 1.31
CHD1O14646 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC23.25■■□□□ 1.31
CHD1O14646 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CHD1O14646 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 BX679664.3-201ENST00000414070 555 ntBASIC23.25■■□□□ 1.31
CHD1O14646 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 AC113935.1-201ENST00000471722 555 ntBASIC23.25■■□□□ 1.31
CHD1O14646 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD1O14646 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD1O14646 EML3-216ENST00000529309 2909 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD1O14646 EMP3-204ENST00000596315 761 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD1O14646 AC087072.1-201ENST00000603727 421 ntBASIC23.25■■□□□ 1.31
CHD1O14646 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1O14646 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD1O14646 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD1O14646 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CHD1O14646 RPL18AP16-201ENST00000424057 531 ntBASIC23.24■■□□□ 1.31
CHD1O14646 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD1O14646 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC23.24■■□□□ 1.31
CHD1O14646 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC23.24■■□□□ 1.31
CHD1O14646 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC23.24■■□□□ 1.31
CHD1O14646 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD1O14646 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD1O14646 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD1O14646 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1O14646 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1O14646 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC23.23■■□□□ 1.31
CHD1O14646 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1O14646 AC006504.5-208ENST00000588784 2401 ntBASIC23.23■■□□□ 1.31
CHD1O14646 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1O14646 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC23.23■■□□□ 1.31
CHD1O14646 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC23.23■■□□□ 1.31
CHD1O14646 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CHD1O14646 AC099328.1-201ENST00000498809 1030 ntBASIC23.23■■□□□ 1.31
CHD1O14646 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CHD1O14646 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC23.23■■□□□ 1.31
CHD1O14646 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC23.23■■□□□ 1.31
CHD1O14646 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC23.23■■□□□ 1.31
CHD1O14646 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1O14646 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC23.23■■□□□ 1.31
CHD1O14646 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC23.23■■□□□ 1.31
CHD1O14646 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1O14646 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms