Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 KRT90P-201ENST00000549264 1064 ntBASIC14.27□□□□□ -0.13
LRIT2A6NDA9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 ECM1P1-201ENST00000604092 1279 ntBASIC14.27□□□□□ -0.13
LRIT2A6NDA9 AC138696.2-201ENST00000607376 223 ntBASIC14.27□□□□□ -0.13
LRIT2A6NDA9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 AC140479.7-201ENST00000636301 2332 ntBASIC14.27□□□□□ -0.13
LRIT2A6NDA9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRIT2A6NDA9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 FKBP4P6-201ENST00000457486 1332 ntBASIC14.26□□□□□ -0.13
LRIT2A6NDA9 AL365209.1-201ENST00000624418 6473 ntBASIC14.26□□□□□ -0.13
LRIT2A6NDA9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 AL590640.2-201ENST00000457038 527 ntBASIC14.26□□□□□ -0.13
LRIT2A6NDA9 CROCCP4-201ENST00000457096 498 ntBASIC14.26□□□□□ -0.13
LRIT2A6NDA9 KRT17P8-201ENST00000540749 863 ntBASIC14.26□□□□□ -0.13
LRIT2A6NDA9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 INE2-201ENST00000630399 1874 ntBASIC14.26□□□□□ -0.13
LRIT2A6NDA9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.26□□□□□ -0.13
LRIT2A6NDA9 AC011840.2-201ENST00000563063 1520 ntBASIC14.25□□□□□ -0.13
LRIT2A6NDA9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 AC006001.1-201ENST00000325130 474 ntBASIC14.25□□□□□ -0.13
LRIT2A6NDA9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 ARSEP1-201ENST00000420443 635 ntBASIC14.25□□□□□ -0.13
LRIT2A6NDA9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 U91328.1-201ENST00000437528 223 ntBASIC14.25□□□□□ -0.13
LRIT2A6NDA9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 AP000812.2-201ENST00000538934 718 ntBASIC14.25□□□□□ -0.13
LRIT2A6NDA9 AC078819.1-201ENST00000547454 765 ntBASIC14.25□□□□□ -0.13
LRIT2A6NDA9 AC012085.1-201ENST00000548270 765 ntBASIC14.25□□□□□ -0.13
LRIT2A6NDA9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 AC006453.4-201ENST00000636949 1252 ntBASIC14.25□□□□□ -0.13
LRIT2A6NDA9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRIT2A6NDA9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms