Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC138969.3-201ENST00000546612 1459 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC138932.2-201ENST00000548268 1459 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC126755.4-201ENST00000549796 1459 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 MIR574-201ENST00000385209 96 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 SPDYE7P-202ENST00000420373 878 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 DNAJB3-201ENST00000446806 729 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 KRT18P43-201ENST00000469825 1281 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AP000344.2-201ENST00000512987 629 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC025048.3-201ENST00000590609 569 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC004835.2-201ENST00000603762 682 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AC005702.4-201ENST00000618393 416 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AL033527.5-202ENST00000641632 1098 ntBASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CMSS1Q9BQ75 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AC104457.1-201ENST00000401024 814 ntBASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 MIR4469-201ENST00000583919 79 ntBASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AF228730.6-201ENST00000641497 218 ntBASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AC084121.3-201ENST00000641716 218 ntBASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AL928921.2-201ENST00000641325 2442 ntBASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMSS1Q9BQ75 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms