Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL13Q99616 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL13Q99616 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCL13Q99616 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL13Q99616 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL13Q99616 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CCL13Q99616 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL13Q99616 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL13Q99616 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL13Q99616 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 TPM3P8-201ENST00000330554 643 ntBASIC12.61□□□□□ -0.39
CCL13Q99616 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL13Q99616 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CCL13Q99616 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL13Q99616 AC234783.1-201ENST00000441761 496 ntBASIC12.61□□□□□ -0.39
CCL13Q99616 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL13Q99616 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL13Q99616 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL13Q99616 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CCL13Q99616 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.61□□□□□ -0.39
CCL13Q99616 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL13Q99616 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL13Q99616 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL13Q99616 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL13Q99616 AC004466.1-201ENST00000599515 1080 ntBASIC12.61□□□□□ -0.39
CCL13Q99616 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL13Q99616 AL162274.1-201ENST00000617191 1098 ntBASIC12.61□□□□□ -0.39
CCL13Q99616 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL13Q99616 AL603764.1-201ENST00000636452 321 ntBASIC12.61□□□□□ -0.39
CCL13Q99616 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL13Q99616 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL13Q99616 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 AC023090.2-201ENST00000625182 2110 ntBASIC12.61□□□□□ -0.39
CCL13Q99616 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL13Q99616 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CCL13Q99616 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.6□□□□□ -0.39
CCL13Q99616 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.6□□□□□ -0.39
CCL13Q99616 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 AL512343.1-201ENST00000605837 169 ntBASIC12.6□□□□□ -0.39
CCL13Q99616 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 ENPP7P14-201ENST00000621765 1040 ntBASIC12.6□□□□□ -0.39
CCL13Q99616 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms