Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 AC097359.2-201ENST00000604992 2389 ntBASIC15.16■□□□□ 0.02
NDNQ99608 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NDNQ99608 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 AL158070.2-201ENST00000623713 1621 ntBASIC15.15■□□□□ 0.02
NDNQ99608 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.15■□□□□ 0.02
NDNQ99608 CYMP-203ENST00000474680 1263 ntBASIC15.15■□□□□ 0.02
NDNQ99608 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.15■□□□□ 0.02
NDNQ99608 AL662799.1-202ENST00000614205 422 ntBASIC15.15■□□□□ 0.02
NDNQ99608 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.15■□□□□ 0.02
NDNQ99608 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NDNQ99608 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NDNQ99608 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NDNQ99608 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.14■□□□□ 0.01
NDNQ99608 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.14■□□□□ 0.01
NDNQ99608 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.14■□□□□ 0.01
NDNQ99608 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 AL138799.1-201ENST00000448213 1675 ntBASIC15.14■□□□□ 0.01
NDNQ99608 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.14■□□□□ 0.01
NDNQ99608 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.14■□□□□ 0.01
NDNQ99608 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.14■□□□□ 0.01
NDNQ99608 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.14■□□□□ 0.01
NDNQ99608 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.14■□□□□ 0.01
NDNQ99608 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.14■□□□□ 0.01
NDNQ99608 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.14■□□□□ 0.01
NDNQ99608 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NDNQ99608 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 MIR8072-201ENST00000614241 80 ntBASIC15.14■□□□□ 0.01
NDNQ99608 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.14■□□□□ 0.01
NDNQ99608 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NDNQ99608 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.14■□□□□ 0.01
NDNQ99608 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NDNQ99608 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NDNQ99608 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms