Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 RN7SL555P-201ENST00000584742 339 ntBASIC17.57■□□□□ 0.4
TRIM47Q96LD4 AP000346.4-201ENST00000614827 381 ntBASIC17.57■□□□□ 0.4
TRIM47Q96LD4 AC022748.3-201ENST00000621828 275 ntBASIC17.57■□□□□ 0.4
TRIM47Q96LD4 AP001002.3-201ENST00000623482 206 ntBASIC17.57■□□□□ 0.4
TRIM47Q96LD4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM47Q96LD4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 KRT8P4-201ENST00000509735 1454 ntBASIC17.56■□□□□ 0.4
TRIM47Q96LD4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 AC007274.2-201ENST00000421675 662 ntBASIC17.56■□□□□ 0.4
TRIM47Q96LD4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 AC005740.2-201ENST00000511085 419 ntBASIC17.56■□□□□ 0.4
TRIM47Q96LD4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 IQSEC3P1-201ENST00000538799 536 ntBASIC17.56■□□□□ 0.4
TRIM47Q96LD4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 MIR3147-201ENST00000577811 66 ntBASIC17.56■□□□□ 0.4
TRIM47Q96LD4 OR10B1P-201ENST00000601666 907 ntBASIC17.56■□□□□ 0.4
TRIM47Q96LD4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.56■□□□□ 0.4
TRIM47Q96LD4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM47Q96LD4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 AL161772.1-201ENST00000610494 4412 ntBASIC17.55■□□□□ 0.4
TRIM47Q96LD4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms