Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 AC114812.1-204ENST00000449669 728 ntBASIC15.9■□□□□ 0.14
ATP2A3Q93084 RPL13AP20-201ENST00000459725 609 ntBASIC15.9■□□□□ 0.14
ATP2A3Q93084 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 AC108725.1-201ENST00000495472 409 ntBASIC15.9■□□□□ 0.14
ATP2A3Q93084 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 AC025181.2-201ENST00000606994 802 ntBASIC15.9■□□□□ 0.14
ATP2A3Q93084 GPR182-203ENST00000622922 591 ntBASIC15.9■□□□□ 0.14
ATP2A3Q93084 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP2A3Q93084 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP2A3Q93084 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 ACTBP8-201ENST00000403258 1108 ntBASIC15.89■□□□□ 0.13
ATP2A3Q93084 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.89■□□□□ 0.13
ATP2A3Q93084 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 AC091951.1-201ENST00000512854 2465 ntBASIC15.89■□□□□ 0.13
ATP2A3Q93084 AHCYP2-201ENST00000430630 1300 ntBASIC15.89■□□□□ 0.13
ATP2A3Q93084 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP2A3Q93084 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATP2A3Q93084 AL138709.1-201ENST00000614840 1693 ntBASIC15.89■□□□□ 0.13
ATP2A3Q93084 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms