Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 MIR3907-201ENST00000579424 151 ntBASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 AC002472.3-201ENST00000640124 621 ntBASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 AL805961.1-203ENST00000641078 1258 ntBASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 MST1L-201ENST00000442552 2185 ntBASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 C18orf15-201ENST00000623680 2534 ntBASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.14■□□□□ 0.17
COLGALT1Q8NBJ5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AC067930.6-201ENST00000623257 4947 ntBASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AC012618.1-201ENST00000461223 412 ntBASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AC100827.2-201ENST00000563214 1194 ntBASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AC005324.6-201ENST00000587972 613 ntBASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AC009955.4-201ENST00000597192 544 ntBASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 AC068587.8-201ENST00000641239 219 ntBASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLGALT1Q8NBJ5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COLGALT1Q8NBJ5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms