Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 AL136309.1-201ENST00000403917 691 ntBASIC17.82■□□□□ 0.44
CTR9Q6PD62 BTBD6P1-201ENST00000412176 1267 ntBASIC17.82■□□□□ 0.44
CTR9Q6PD62 HIST2H2BB-201ENST00000449108 381 ntBASIC17.82■□□□□ 0.44
CTR9Q6PD62 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CTR9Q6PD62 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTR9Q6PD62 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 AC007969.1-201ENST00000433675 447 ntBASIC17.81■□□□□ 0.44
CTR9Q6PD62 MTX1P1-201ENST00000440904 838 ntBASIC17.81■□□□□ 0.44
CTR9Q6PD62 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 AL096828.3-201ENST00000615354 462 ntBASIC17.81■□□□□ 0.44
CTR9Q6PD62 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.81■□□□□ 0.44
CTR9Q6PD62 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTR9Q6PD62 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.81■□□□□ 0.44
CTR9Q6PD62 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 AC104581.4-201ENST00000623126 3052 ntBASIC17.8■□□□□ 0.44
CTR9Q6PD62 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 PFN1P12-201ENST00000455938 534 ntBASIC17.8■□□□□ 0.44
CTR9Q6PD62 AC100850.1-201ENST00000506768 649 ntBASIC17.8■□□□□ 0.44
CTR9Q6PD62 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 AL358472.3-201ENST00000608147 415 ntBASIC17.8■□□□□ 0.44
CTR9Q6PD62 AC005695.3-201ENST00000614522 232 ntBASIC17.8■□□□□ 0.44
CTR9Q6PD62 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.8■□□□□ 0.44
CTR9Q6PD62 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTR9Q6PD62 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms