Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 AL354718.3-201ENST00000616414 581 ntBASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 CR382287.1-201ENST00000623954 586 ntBASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 FLJ16779-201ENST00000612722 7638 ntBASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTPN20Q4JDL3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 TPM3P8-201ENST00000330554 643 ntBASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 AC007551.1-201ENST00000457394 519 ntBASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 RNA5SP486-201ENST00000515961 83 ntBASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 AC078819.1-201ENST00000547454 765 ntBASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 AC012085.1-201ENST00000548270 765 ntBASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PTPN20Q4JDL3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN20Q4JDL3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 FKBP4P6-201ENST00000457486 1332 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AL136379.1-201ENST00000623471 2642 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AC009093.2-202ENST00000620513 2079 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 CNN2P8-201ENST00000421872 913 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AC016694.1-201ENST00000434179 700 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 FTLP10-202ENST00000505798 471 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AC106820.3-201ENST00000561653 397 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms