Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.58□□□□□ -0.24
CASP6P55212 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 AC079328.2-201ENST00000561241 3354 ntBASIC13.58□□□□□ -0.24
CASP6P55212 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.58□□□□□ -0.24
CASP6P55212 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CASP6P55212 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.57□□□□□ -0.24
CASP6P55212 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.57□□□□□ -0.24
CASP6P55212 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.57□□□□□ -0.24
CASP6P55212 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.57□□□□□ -0.24
CASP6P55212 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.57□□□□□ -0.24
CASP6P55212 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CASP6P55212 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.57□□□□□ -0.24
CASP6P55212 AL136309.1-201ENST00000403917 691 ntBASIC13.57□□□□□ -0.24
CASP6P55212 RPL5P21-201ENST00000404620 815 ntBASIC13.57□□□□□ -0.24
CASP6P55212 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.57□□□□□ -0.24
CASP6P55212 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.57□□□□□ -0.24
CASP6P55212 RN7SL11P-201ENST00000471305 293 ntBASIC13.57□□□□□ -0.24
CASP6P55212 FTLP10-202ENST00000505798 471 ntBASIC13.57□□□□□ -0.24
CASP6P55212 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.57□□□□□ -0.24
CASP6P55212 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.57□□□□□ -0.24
CASP6P55212 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.57□□□□□ -0.24
CASP6P55212 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.57□□□□□ -0.24
CASP6P55212 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
CASP6P55212 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CASP6P55212 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CASP6P55212 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 KRT8P29-201ENST00000420409 1371 ntBASIC13.57□□□□□ -0.24
CASP6P55212 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CASP6P55212 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.56□□□□□ -0.24
CASP6P55212 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CASP6P55212 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CASP6P55212 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CASP6P55212 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.56□□□□□ -0.24
CASP6P55212 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.56□□□□□ -0.24
CASP6P55212 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 RN7SL720P-201ENST00000488178 304 ntBASIC13.56□□□□□ -0.24
CASP6P55212 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.56□□□□□ -0.24
CASP6P55212 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 AC044849.1-201ENST00000519737 1188 ntBASIC13.56□□□□□ -0.24
CASP6P55212 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.56□□□□□ -0.24
CASP6P55212 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.56□□□□□ -0.24
CASP6P55212 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.56□□□□□ -0.24
CASP6P55212 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.56□□□□□ -0.24
CASP6P55212 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 AP001505.2-201ENST00000616815 443 ntBASIC13.56□□□□□ -0.24
CASP6P55212 AL136295.7-201ENST00000619226 1200 ntBASIC13.56□□□□□ -0.24
CASP6P55212 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 AC084364.1-201ENST00000551967 1556 ntBASIC13.56□□□□□ -0.24
CASP6P55212 MTHFR-217ENST00000641820 1569 ntBASIC13.56□□□□□ -0.24
CASP6P55212 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.56□□□□□ -0.24
CASP6P55212 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CASP6P55212 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.56□□□□□ -0.24
CASP6P55212 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CASP6P55212 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.56□□□□□ -0.24
CASP6P55212 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CASP6P55212 AC069224.1-201ENST00000566372 1715 ntBASIC13.56□□□□□ -0.24
CASP6P55212 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms