Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC019193.1-201ENST00000506678 823 ntBASIC12.98□□□□□ -0.33
HCFC1P51610 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.98□□□□□ -0.33
HCFC1P51610 MEG3_2.1-201ENST00000611456 105 ntBASIC12.98□□□□□ -0.33
HCFC1P51610 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 AC068418.2-201ENST00000577309 3703 ntBASIC12.98□□□□□ -0.33
HCFC1P51610 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
HCFC1P51610 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
HCFC1P51610 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.98□□□□□ -0.33
HCFC1P51610 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 TLE1P1-201ENST00000422965 589 ntBASIC12.98□□□□□ -0.33
HCFC1P51610 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.98□□□□□ -0.33
HCFC1P51610 MIR3677-201ENST00000578964 60 ntBASIC12.98□□□□□ -0.33
HCFC1P51610 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC007718.1-201ENST00000621078 280 ntBASIC12.98□□□□□ -0.33
HCFC1P51610 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 NAP1L6-202ENST00000641404 1222 ntBASIC12.98□□□□□ -0.33
HCFC1P51610 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.98□□□□□ -0.33
HCFC1P51610 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HCFC1P51610 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HCFC1P51610 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.97□□□□□ -0.33
HCFC1P51610 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.97□□□□□ -0.33
HCFC1P51610 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
HCFC1P51610 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HCFC1P51610 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HCFC1P51610 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
HCFC1P51610 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.97□□□□□ -0.33
HCFC1P51610 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.97□□□□□ -0.33
HCFC1P51610 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.97□□□□□ -0.33
HCFC1P51610 NDUFS6P1-201ENST00000485187 316 ntBASIC12.97□□□□□ -0.33
HCFC1P51610 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.97□□□□□ -0.33
HCFC1P51610 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.97□□□□□ -0.33
HCFC1P51610 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.97□□□□□ -0.33
HCFC1P51610 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.97□□□□□ -0.33
HCFC1P51610 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.97□□□□□ -0.33
HCFC1P51610 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 CICP11-201ENST00000434745 2827 ntBASIC12.97□□□□□ -0.33
HCFC1P51610 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HCFC1P51610 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HCFC1P51610 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms