Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.32□□□□□ -0.44
CEACAM3P40198 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CEACAM3P40198 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.32□□□□□ -0.44
CEACAM3P40198 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
CEACAM3P40198 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.32□□□□□ -0.44
CEACAM3P40198 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CEACAM3P40198 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.32□□□□□ -0.44
CEACAM3P40198 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
CEACAM3P40198 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.32□□□□□ -0.44
CEACAM3P40198 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.32□□□□□ -0.44
CEACAM3P40198 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 AGAP7P-201ENST00000582299 2062 ntBASIC12.32□□□□□ -0.44
CEACAM3P40198 AGAP14-201ENST00000624701 2060 ntBASIC12.32□□□□□ -0.44
CEACAM3P40198 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 AC063926.2-201ENST00000623766 1308 ntBASIC12.32□□□□□ -0.44
CEACAM3P40198 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.32□□□□□ -0.44
CEACAM3P40198 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CEACAM3P40198 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CEACAM3P40198 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.32□□□□□ -0.44
CEACAM3P40198 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.31□□□□□ -0.44
CEACAM3P40198 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CEACAM3P40198 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.31□□□□□ -0.44
CEACAM3P40198 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.31□□□□□ -0.44
CEACAM3P40198 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.31□□□□□ -0.44
CEACAM3P40198 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CEACAM3P40198 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CEACAM3P40198 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CEACAM3P40198 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CEACAM3P40198 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.31□□□□□ -0.44
CEACAM3P40198 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.31□□□□□ -0.44
CEACAM3P40198 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.31□□□□□ -0.44
CEACAM3P40198 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.31□□□□□ -0.44
CEACAM3P40198 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.31□□□□□ -0.44
CEACAM3P40198 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CEACAM3P40198 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.31□□□□□ -0.44
CEACAM3P40198 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.31□□□□□ -0.44
CEACAM3P40198 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.31□□□□□ -0.44
CEACAM3P40198 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.31□□□□□ -0.44
CEACAM3P40198 AC233724.13-201ENST00000598383 410 ntBASIC12.31□□□□□ -0.44
CEACAM3P40198 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CEACAM3P40198 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.31□□□□□ -0.44
CEACAM3P40198 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms