Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR339-201ENST00000362153 94 ntBASIC19.09■□□□□ 0.65
RXRBP28702 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RXRBP28702 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC19.09■□□□□ 0.65
RXRBP28702 GRPEL2P1-201ENST00000453145 339 ntBASIC19.09■□□□□ 0.65
RXRBP28702 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC19.09■□□□□ 0.65
RXRBP28702 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC19.09■□□□□ 0.65
RXRBP28702 DPY19L2P4-201ENST00000479881 442 ntBASIC19.09■□□□□ 0.65
RXRBP28702 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RXRBP28702 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RXRBP28702 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC19.09■□□□□ 0.65
RXRBP28702 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC19.09■□□□□ 0.65
RXRBP28702 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC19.09■□□□□ 0.65
RXRBP28702 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC19.09■□□□□ 0.65
RXRBP28702 CLPP-205ENST00000596605 646 ntTSL 2 BASIC19.09■□□□□ 0.65
RXRBP28702 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 AC013726.1-201ENST00000563747 2285 ntBASIC19.09■□□□□ 0.65
RXRBP28702 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RXRBP28702 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RXRBP28702 AGGF1P1-201ENST00000509500 2073 ntBASIC19.09■□□□□ 0.65
RXRBP28702 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC19.08■□□□□ 0.65
RXRBP28702 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RXRBP28702 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RXRBP28702 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RXRBP28702 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RXRBP28702 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RXRBP28702 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.08■□□□□ 0.64
RXRBP28702 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RXRBP28702 AC026884.1-201ENST00000418296 457 ntBASIC19.08■□□□□ 0.64
RXRBP28702 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC19.08■□□□□ 0.64
RXRBP28702 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 KRT19P4-201ENST00000443208 943 ntBASIC19.08■□□□□ 0.64
RXRBP28702 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC19.08■□□□□ 0.64
RXRBP28702 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC19.08■□□□□ 0.64
RXRBP28702 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19.08■□□□□ 0.64
RXRBP28702 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC19.08■□□□□ 0.64
RXRBP28702 AC005777.1-201ENST00000588332 187 ntBASIC19.08■□□□□ 0.64
RXRBP28702 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC19.08■□□□□ 0.64
RXRBP28702 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
RXRBP28702 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RXRBP28702 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RXRBP28702 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 AC007952.5-201ENST00000572818 1486 ntBASIC19.08■□□□□ 0.64
RXRBP28702 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.08■□□□□ 0.64
RXRBP28702 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RXRBP28702 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RXRBP28702 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.07■□□□□ 0.64
RXRBP28702 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.07■□□□□ 0.64
RXRBP28702 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC19.07■□□□□ 0.64
RXRBP28702 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RXRBP28702 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC19.07■□□□□ 0.64
RXRBP28702 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.07■□□□□ 0.64
RXRBP28702 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 SIRPB3P-201ENST00000340424 1216 ntBASIC19.07■□□□□ 0.64
RXRBP28702 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RXRBP28702 HNRNPA1P21-201ENST00000424115 961 ntBASIC19.07■□□□□ 0.64
RXRBP28702 RPL18AP15-201ENST00000430258 517 ntBASIC19.07■□□□□ 0.64
RXRBP28702 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 RNASEH2CP1-201ENST00000454281 502 ntBASIC19.07■□□□□ 0.64
RXRBP28702 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RXRBP28702 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.07■□□□□ 0.64
RXRBP28702 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC19.07■□□□□ 0.64
RXRBP28702 MST1L-204ENST00000545160 559 ntTSL 4 BASIC19.07■□□□□ 0.64
RXRBP28702 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC19.07■□□□□ 0.64
RXRBP28702 MIR4746-201ENST00000579802 71 ntBASIC19.07■□□□□ 0.64
RXRBP28702 AC132812.1-201ENST00000583145 892 ntBASIC19.07■□□□□ 0.64
RXRBP28702 AP005264.5-201ENST00000590066 467 ntBASIC19.07■□□□□ 0.64
RXRBP28702 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RXRBP28702 AC073869.4-201ENST00000620841 800 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms