Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC233724.13-201ENST00000598383 410 ntBASIC15.75■□□□□ 0.11
MMP8P22894 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP8P22894 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
MMP8P22894 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP8P22894 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 AC020910.5-201ENST00000623668 1865 ntBASIC15.75■□□□□ 0.11
MMP8P22894 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP8P22894 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
MMP8P22894 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
MMP8P22894 AC015656.1-201ENST00000624209 3578 ntBASIC15.75■□□□□ 0.11
MMP8P22894 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MMP8P22894 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP8P22894 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP8P22894 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MMP8P22894 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
MMP8P22894 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 MRPL37P1-201ENST00000592451 1337 ntBASIC15.74■□□□□ 0.11
MMP8P22894 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MMP8P22894 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MMP8P22894 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MMP8P22894 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP8P22894 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.74■□□□□ 0.11
MMP8P22894 BCRP2-202ENST00000447763 634 ntBASIC15.74■□□□□ 0.11
MMP8P22894 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP8P22894 AL391280.1-201ENST00000506969 1062 ntBASIC15.74■□□□□ 0.11
MMP8P22894 BCRP6-201ENST00000510112 632 ntBASIC15.74■□□□□ 0.11
MMP8P22894 BCRP7-201ENST00000511549 544 ntBASIC15.74■□□□□ 0.11
MMP8P22894 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 BTNL10-201ENST00000595971 695 ntBASIC15.74■□□□□ 0.11
MMP8P22894 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP8P22894 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MMP8P22894 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP8P22894 AP000593.2-201ENST00000542775 1433 ntBASIC15.74■□□□□ 0.11
MMP8P22894 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MMP8P22894 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MMP8P22894 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 AL136172.1-201ENST00000598590 1394 ntBASIC15.74■□□□□ 0.11
MMP8P22894 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP8P22894 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP8P22894 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 FKBP4P6-201ENST00000457486 1332 ntBASIC15.73■□□□□ 0.11
MMP8P22894 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
MMP8P22894 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 TPM3P8-201ENST00000330554 643 ntBASIC15.73■□□□□ 0.11
MMP8P22894 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 NME2P1-201ENST00000426182 414 ntBASIC15.73■□□□□ 0.11
MMP8P22894 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP8P22894 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.73■□□□□ 0.11
MMP8P22894 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.73■□□□□ 0.11
MMP8P22894 RNA5SP486-201ENST00000515961 83 ntBASIC15.73■□□□□ 0.11
MMP8P22894 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.73■□□□□ 0.11
MMP8P22894 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP8P22894 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.73■□□□□ 0.11
MMP8P22894 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms