Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH3P22223 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDH3P22223 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH3P22223 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH3P22223 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH3P22223 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH3P22223 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH3P22223 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH3P22223 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH3P22223 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDH3P22223 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 AC087386.2-201ENST00000623212 4637 ntBASIC14.83□□□□□ -0.04
CDH3P22223 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH3P22223 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH3P22223 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH3P22223 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDH3P22223 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH3P22223 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDH3P22223 ACKR1-201ENST00000368121 1240 ntBASIC14.83□□□□□ -0.04
CDH3P22223 MIR658-201ENST00000385210 100 ntBASIC14.83□□□□□ -0.04
CDH3P22223 AC005229.1-201ENST00000392885 409 ntBASIC14.83□□□□□ -0.04
CDH3P22223 RPL5P21-201ENST00000404620 815 ntBASIC14.83□□□□□ -0.04
CDH3P22223 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH3P22223 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDH3P22223 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH3P22223 AC004066.1-201ENST00000502488 802 ntBASIC14.83□□□□□ -0.04
CDH3P22223 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH3P22223 AP001889.1-201ENST00000525414 633 ntBASIC14.83□□□□□ -0.04
CDH3P22223 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH3P22223 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH3P22223 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH3P22223 MIR6805-201ENST00000615055 62 ntBASIC14.83□□□□□ -0.04
CDH3P22223 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDH3P22223 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH3P22223 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH3P22223 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CDH3P22223 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 MSTO2P-201ENST00000314835 1709 ntBASIC14.83□□□□□ -0.04
CDH3P22223 AC105250.1-201ENST00000509378 2057 ntBASIC14.83□□□□□ -0.04
CDH3P22223 AC232323.1-201ENST00000540724 2099 ntBASIC14.83□□□□□ -0.04
CDH3P22223 REXO1L5P-201ENST00000622260 2098 ntBASIC14.83□□□□□ -0.04
CDH3P22223 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH3P22223 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH3P22223 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH3P22223 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH3P22223 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
CDH3P22223 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH3P22223 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 SSR4P1-203ENST00000599569 2260 ntBASIC14.82□□□□□ -0.04
CDH3P22223 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH3P22223 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH3P22223 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH3P22223 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH3P22223 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDH3P22223 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDH3P22223 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.82□□□□□ -0.04
CDH3P22223 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH3P22223 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH3P22223 AC022137.2-201ENST00000503482 481 ntBASIC14.82□□□□□ -0.04
CDH3P22223 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH3P22223 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH3P22223 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH3P22223 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.82□□□□□ -0.04
CDH3P22223 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH3P22223 AP005019.2-201ENST00000615104 511 ntBASIC14.82□□□□□ -0.04
CDH3P22223 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDH3P22223 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH3P22223 LINC00552-201ENST00000625151 2579 ntBASIC14.82□□□□□ -0.04
CDH3P22223 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH3P22223 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDH3P22223 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDH3P22223 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms