Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.01□□□□□ -0.17
UBL4AP11441 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBL4AP11441 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.01□□□□□ -0.17
UBL4AP11441 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBL4AP11441 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14□□□□□ -0.17
UBL4AP11441 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14□□□□□ -0.17
UBL4AP11441 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 KRT8P22-201ENST00000562317 1415 ntBASIC14□□□□□ -0.17
UBL4AP11441 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14□□□□□ -0.17
UBL4AP11441 LILRP1-201ENST00000444199 1370 ntBASIC14□□□□□ -0.17
UBL4AP11441 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 LINC01101-201ENST00000622953 1884 ntBASIC14□□□□□ -0.17
UBL4AP11441 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14□□□□□ -0.17
UBL4AP11441 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
UBL4AP11441 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14□□□□□ -0.17
UBL4AP11441 NUS1P3-201ENST00000423502 862 ntBASIC14□□□□□ -0.17
UBL4AP11441 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14□□□□□ -0.17
UBL4AP11441 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14□□□□□ -0.17
UBL4AP11441 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 AC190387.1-201ENST00000551683 408 ntBASIC14□□□□□ -0.17
UBL4AP11441 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 AL359711.2-201ENST00000563105 872 ntBASIC14□□□□□ -0.17
UBL4AP11441 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14□□□□□ -0.17
UBL4AP11441 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 AC117489.1-201ENST00000625169 3217 ntBASIC14□□□□□ -0.17
UBL4AP11441 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14□□□□□ -0.17
UBL4AP11441 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UBL4AP11441 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UBL4AP11441 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBL4AP11441 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UBL4AP11441 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 AC013726.1-201ENST00000563747 2285 ntBASIC13.99□□□□□ -0.17
UBL4AP11441 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBL4AP11441 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 HMGN1P19-201ENST00000436976 333 ntBASIC13.99□□□□□ -0.17
UBL4AP11441 ELK1P1-201ENST00000485699 580 ntBASIC13.99□□□□□ -0.17
UBL4AP11441 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.99□□□□□ -0.17
UBL4AP11441 AP001582.1-201ENST00000525856 295 ntBASIC13.99□□□□□ -0.17
UBL4AP11441 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.99□□□□□ -0.17
UBL4AP11441 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.99□□□□□ -0.17
UBL4AP11441 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.99□□□□□ -0.17
UBL4AP11441 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
UBL4AP11441 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UBL4AP11441 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UBL4AP11441 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBL4AP11441 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UBL4AP11441 PTENP1-202ENST00000532280 3996 ntBASIC13.99□□□□□ -0.17
UBL4AP11441 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.99□□□□□ -0.17
UBL4AP11441 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms