Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.41■□□□□ 0.06
MT-ND3P03897 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.41■□□□□ 0.06
MT-ND3P03897 AL645728.2-202ENST00000641679 227 ntBASIC15.41■□□□□ 0.06
MT-ND3P03897 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.41■□□□□ 0.06
MT-ND3P03897 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.41■□□□□ 0.06
MT-ND3P03897 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MT-ND3P03897 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND3P03897 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND3P03897 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-ND3P03897 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND3P03897 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MT-ND3P03897 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MT-ND3P03897 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND3P03897 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND3P03897 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
MT-ND3P03897 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 AL133267.1-201ENST00000398220 340 ntBASIC15.4■□□□□ 0.06
MT-ND3P03897 AL080243.2-201ENST00000418783 582 ntBASIC15.4■□□□□ 0.06
MT-ND3P03897 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-ND3P03897 AL353779.1-201ENST00000434793 351 ntBASIC15.4■□□□□ 0.06
MT-ND3P03897 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.4■□□□□ 0.06
MT-ND3P03897 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.4■□□□□ 0.06
MT-ND3P03897 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND3P03897 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
MT-ND3P03897 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.4■□□□□ 0.06
MT-ND3P03897 AC025181.2-201ENST00000606994 802 ntBASIC15.4■□□□□ 0.06
MT-ND3P03897 AL844908.2-201ENST00000609461 460 ntBASIC15.4■□□□□ 0.06
MT-ND3P03897 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-ND3P03897 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.4■□□□□ 0.06
MT-ND3P03897 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.4■□□□□ 0.06
MT-ND3P03897 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND3P03897 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND3P03897 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.39■□□□□ 0.06
MT-ND3P03897 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
MT-ND3P03897 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-ND3P03897 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 PTENP1-202ENST00000532280 3996 ntBASIC15.39■□□□□ 0.05
MT-ND3P03897 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MT-ND3P03897 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MT-ND3P03897 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-ND3P03897 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-ND3P03897 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.39■□□□□ 0.05
MT-ND3P03897 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.39■□□□□ 0.05
MT-ND3P03897 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 AC074338.1-201ENST00000416825 156 ntBASIC15.39■□□□□ 0.05
MT-ND3P03897 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
MT-ND3P03897 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 AP005018.1-201ENST00000525475 301 ntBASIC15.39■□□□□ 0.05
MT-ND3P03897 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND3P03897 AC009407.1-201ENST00000568958 598 ntBASIC15.39■□□□□ 0.05
MT-ND3P03897 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND3P03897 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms