Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.92■□□□□ 0.14
TIMP1P01033 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.92■□□□□ 0.14
TIMP1P01033 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.92■□□□□ 0.14
TIMP1P01033 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.92■□□□□ 0.14
TIMP1P01033 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.92■□□□□ 0.14
TIMP1P01033 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TIMP1P01033 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.92■□□□□ 0.14
TIMP1P01033 AC021305.1-201ENST00000520656 1514 ntBASIC15.92■□□□□ 0.14
TIMP1P01033 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TIMP1P01033 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.92■□□□□ 0.14
TIMP1P01033 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TIMP1P01033 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TIMP1P01033 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 CYP2T1P-202ENST00000641596 2535 ntBASIC15.92■□□□□ 0.14
TIMP1P01033 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TIMP1P01033 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TIMP1P01033 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
TIMP1P01033 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TIMP1P01033 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TIMP1P01033 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMP1P01033 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.91■□□□□ 0.14
TIMP1P01033 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMP1P01033 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TIMP1P01033 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMP1P01033 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.91■□□□□ 0.14
TIMP1P01033 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TIMP1P01033 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TIMP1P01033 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.91■□□□□ 0.14
TIMP1P01033 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMP1P01033 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TIMP1P01033 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMP1P01033 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMP1P01033 AC068867.1-201ENST00000559855 150 ntBASIC15.91■□□□□ 0.14
TIMP1P01033 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.91■□□□□ 0.14
TIMP1P01033 AC124068.2-201ENST00000569473 1109 ntBASIC15.91■□□□□ 0.14
TIMP1P01033 RN7SL357P-201ENST00000581065 298 ntBASIC15.91■□□□□ 0.14
TIMP1P01033 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.91■□□□□ 0.14
TIMP1P01033 AC002044.2-201ENST00000624910 970 ntBASIC15.91■□□□□ 0.14
TIMP1P01033 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TIMP1P01033 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.91■□□□□ 0.14
TIMP1P01033 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TIMP1P01033 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TIMP1P01033 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMP1P01033 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMP1P01033 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TIMP1P01033 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 KRT8P28-201ENST00000433288 1390 ntBASIC15.9■□□□□ 0.14
TIMP1P01033 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.9■□□□□ 0.14
TIMP1P01033 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.9■□□□□ 0.14
TIMP1P01033 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TIMP1P01033 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.9■□□□□ 0.14
TIMP1P01033 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.9■□□□□ 0.14
TIMP1P01033 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.9■□□□□ 0.14
TIMP1P01033 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TIMP1P01033 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.9■□□□□ 0.14
TIMP1P01033 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.9■□□□□ 0.14
TIMP1P01033 AC018638.5-201ENST00000450885 754 ntBASIC15.9■□□□□ 0.14
TIMP1P01033 AL135901.1-201ENST00000451812 333 ntBASIC15.9■□□□□ 0.14
TIMP1P01033 OR5BD1P-201ENST00000532527 817 ntBASIC15.9■□□□□ 0.14
TIMP1P01033 EIF5AP2-201ENST00000585668 1047 ntBASIC15.9■□□□□ 0.14
TIMP1P01033 AC018695.6-201ENST00000614011 534 ntBASIC15.9■□□□□ 0.14
TIMP1P01033 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.9■□□□□ 0.14
TIMP1P01033 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TIMP1P01033 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.9■□□□□ 0.14
TIMP1P01033 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TIMP1P01033 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms