Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST1O76090 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 AC018735.1-201ENST00000437208 1502 ntBASIC15.69■□□□□ 0.1
BEST1O76090 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST1O76090 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST1O76090 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST1O76090 AC079178.1-201ENST00000420915 656 ntBASIC15.69■□□□□ 0.1
BEST1O76090 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.69■□□□□ 0.1
BEST1O76090 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 BX088702.1-201ENST00000610784 235 ntBASIC15.69■□□□□ 0.1
BEST1O76090 AL136301.1-201ENST00000615830 422 ntBASIC15.69■□□□□ 0.1
BEST1O76090 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
BEST1O76090 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
BEST1O76090 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
BEST1O76090 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
BEST1O76090 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.69■□□□□ 0.1
BEST1O76090 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BEST1O76090 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.69■□□□□ 0.1
BEST1O76090 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.68■□□□□ 0.1
BEST1O76090 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.68■□□□□ 0.1
BEST1O76090 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST1O76090 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST1O76090 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST1O76090 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.68■□□□□ 0.1
BEST1O76090 AC005730.2-201ENST00000564549 1184 ntBASIC15.68■□□□□ 0.1
BEST1O76090 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.68■□□□□ 0.1
BEST1O76090 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.68■□□□□ 0.1
BEST1O76090 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 E2F3P2-201ENST00000447755 1422 ntBASIC15.68■□□□□ 0.1
BEST1O76090 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BEST1O76090 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.67■□□□□ 0.1
BEST1O76090 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
BEST1O76090 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.67■□□□□ 0.1
BEST1O76090 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BEST1O76090 MIR663B-201ENST00000408361 115 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms