Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LDB3O75112 AC106886.1-201ENST00000568660 600 ntBASIC14.16□□□□□ -0.14
LDB3O75112 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 AC239800.4-201ENST00000603712 296 ntBASIC14.16□□□□□ -0.14
LDB3O75112 AL512343.1-201ENST00000605837 169 ntBASIC14.16□□□□□ -0.14
LDB3O75112 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
LDB3O75112 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LDB3O75112 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 INTS4P1-203ENST00000641008 3683 ntBASIC14.16□□□□□ -0.14
LDB3O75112 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.16□□□□□ -0.14
LDB3O75112 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.16□□□□□ -0.14
LDB3O75112 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.16□□□□□ -0.14
LDB3O75112 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
LDB3O75112 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LDB3O75112 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.16□□□□□ -0.14
LDB3O75112 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 PDIA3P1-201ENST00000471856 1510 ntBASIC14.15□□□□□ -0.14
LDB3O75112 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
LDB3O75112 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LDB3O75112 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.15□□□□□ -0.14
LDB3O75112 AC018442.1-201ENST00000421439 2061 ntBASIC14.15□□□□□ -0.14
LDB3O75112 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 TPM3P8-201ENST00000330554 643 ntBASIC14.15□□□□□ -0.14
LDB3O75112 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LDB3O75112 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 AC079776.1-201ENST00000401540 1152 ntBASIC14.15□□□□□ -0.14
LDB3O75112 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.15□□□□□ -0.14
LDB3O75112 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.15□□□□□ -0.14
LDB3O75112 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.15□□□□□ -0.14
LDB3O75112 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.15□□□□□ -0.14
LDB3O75112 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.15□□□□□ -0.14
LDB3O75112 HILS1-202ENST00000545329 423 ntBASIC14.15□□□□□ -0.14
LDB3O75112 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.15□□□□□ -0.14
LDB3O75112 RN7SL48P-201ENST00000579283 293 ntBASIC14.15□□□□□ -0.14
LDB3O75112 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.15□□□□□ -0.14
LDB3O75112 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 AC132938.4-201ENST00000623835 848 ntBASIC14.15□□□□□ -0.14
LDB3O75112 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LDB3O75112 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.15□□□□□ -0.14
LDB3O75112 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LDB3O75112 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 AC099063.4-201ENST00000641099 1602 ntBASIC14.15□□□□□ -0.14
LDB3O75112 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LDB3O75112 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.15□□□□□ -0.15
LDB3O75112 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
LDB3O75112 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 AC068418.2-201ENST00000577309 3703 ntBASIC14.14□□□□□ -0.15
LDB3O75112 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LDB3O75112 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.14□□□□□ -0.15
LDB3O75112 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LDB3O75112 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 MTHFR-210ENST00000641407 2387 ntBASIC14.14□□□□□ -0.15
LDB3O75112 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.14□□□□□ -0.15
LDB3O75112 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.14□□□□□ -0.15
LDB3O75112 POM121L8P-201ENST00000417732 1281 ntBASIC14.14□□□□□ -0.15
LDB3O75112 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.14□□□□□ -0.15
LDB3O75112 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LDB3O75112 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.14□□□□□ -0.15
LDB3O75112 POM121L9P-203ENST00000441984 1285 ntBASIC14.14□□□□□ -0.15
LDB3O75112 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
LDB3O75112 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms