Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 AC015688.4-201ENST00000580780 1647 ntBASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 LAP3P2-201ENST00000454686 1454 ntBASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 AL161932.2-201ENST00000435436 679 ntBASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 CD164-210ENST00000512821 964 ntTSL 2 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC21.75■■□□□ 1.07
SHANK2Q9UPX8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 OR8T1P-201ENST00000421347 918 ntBASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 FAU-202ENST00000434372 533 ntTSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 RN7SL530P-201ENST00000485097 298 ntBASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC21.74■■□□□ 1.07
SHANK2Q9UPX8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 RPL7P35-201ENST00000446943 740 ntBASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 SORD2P-201ENST00000558556 1069 ntBASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 AC005041.3-201ENST00000606287 649 ntBASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 AL591471.1-201ENST00000621855 229 ntBASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms