Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SLIRPQ9GZT3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 AC106818.1-201ENST00000623223 3242 ntBASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 AGAP12P-201ENST00000585227 2359 ntBASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 AC136604.1-202ENST00000425471 771 ntBASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 AP002414.3-201ENST00000589352 1468 ntBASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.22□□□□□ -0.29
SLIRPQ9GZT3 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 AC142381.1-201ENST00000426099 345 ntBASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 AC105339.3-201ENST00000560043 636 ntBASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 MIR4751-201ENST00000578027 74 ntBASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
SLIRPQ9GZT3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms