Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
COL25A1Q9BXS0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 AC133141.1-201ENST00000443015 339 ntBASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 JPT1-205ENST00000470924 663 ntTSL 5 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 FAM213AP2-201ENST00000521579 683 ntBASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 AL359091.4-201ENST00000610052 409 ntBASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL25A1Q9BXS0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 CHCHD2P6-201ENST00000454346 447 ntBASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 MECP2-226ENST00000640414 897 ntTSL 5 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL25A1Q9BXS0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 AC007292.2-201ENST00000593524 1812 ntBASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 AL138781.2-201ENST00000617896 1843 ntBASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 OR8T1P-201ENST00000421347 918 ntBASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 YY1P2-201ENST00000438766 948 ntBASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 HNRNPA1P73-201ENST00000446472 928 ntBASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 UGT1A12P-201ENST00000447084 853 ntBASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 GYG1-209ENST00000483267 801 ntTSL 2 BASIC14.73□□□□□ -0.05
COL25A1Q9BXS0 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms