Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 DFFBP1-201ENST00000433250 979 ntBASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 AL353779.1-201ENST00000434793 351 ntBASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 AL589987.1-201ENST00000453380 819 ntBASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 API5-211ENST00000534695 560 ntTSL 5 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TUBA1CQ9BQE3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 COL6A4P2-202ENST00000504443 2753 ntBASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 AC005034.1-201ENST00000426657 489 ntBASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 AC093004.1-201ENST00000508850 424 ntBASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 CR383656.2-201ENST00000548656 2254 ntBASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 AC087386.2-201ENST00000623212 4637 ntBASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TUBA1CQ9BQE3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 AP001267.2-201ENST00000532619 2086 ntBASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 AC007326.2-201ENST00000624224 7579 ntBASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.27□□□□□ -0.12
TUBA1CQ9BQE3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms