Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 FRMPD2B-201ENST00000431305 1347 ntBASIC15.84■□□□□ 0.13
CASD1Q96PB1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASD1Q96PB1 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.84■□□□□ 0.13
CASD1Q96PB1 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASD1Q96PB1 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASD1Q96PB1 FAM90A2P-201ENST00000511144 1395 ntBASIC15.84■□□□□ 0.13
CASD1Q96PB1 FAM90A25P-201ENST00000528404 1395 ntBASIC15.84■□□□□ 0.13
CASD1Q96PB1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CASD1Q96PB1 LINC01101-201ENST00000622953 1884 ntBASIC15.84■□□□□ 0.13
CASD1Q96PB1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CASD1Q96PB1 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.84■□□□□ 0.13
CASD1Q96PB1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASD1Q96PB1 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.84■□□□□ 0.13
CASD1Q96PB1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CASD1Q96PB1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CASD1Q96PB1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CASD1Q96PB1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CASD1Q96PB1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CASD1Q96PB1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CASD1Q96PB1 LINC01165-201ENST00000445190 1623 ntBASIC15.83■□□□□ 0.13
CASD1Q96PB1 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
CASD1Q96PB1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CASD1Q96PB1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CASD1Q96PB1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
CASD1Q96PB1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 KRT18P36-201ENST00000411618 1276 ntBASIC15.83■□□□□ 0.12
CASD1Q96PB1 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 AC008723.1-201ENST00000506922 207 ntBASIC15.83■□□□□ 0.12
CASD1Q96PB1 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 CAP2P1-201ENST00000557743 1390 ntBASIC15.83■□□□□ 0.12
CASD1Q96PB1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CASD1Q96PB1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CASD1Q96PB1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 AC018629.1-201ENST00000623381 1736 ntBASIC15.82■□□□□ 0.12
CASD1Q96PB1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 AC098935.1-201ENST00000446057 611 ntBASIC15.82■□□□□ 0.12
CASD1Q96PB1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 AC104784.1-201ENST00000473096 294 ntBASIC15.82■□□□□ 0.12
CASD1Q96PB1 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 MIR3677-201ENST00000578964 60 ntBASIC15.82■□□□□ 0.12
CASD1Q96PB1 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 AL805961.1-201ENST00000642026 753 ntBASIC15.82■□□□□ 0.12
CASD1Q96PB1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 MRPL37P1-201ENST00000592451 1337 ntBASIC15.82■□□□□ 0.12
CASD1Q96PB1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.82■□□□□ 0.12
CASD1Q96PB1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASD1Q96PB1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms