Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AKR1C7P-201ENST00000305623 895 ntBASIC11.29□□□□□ -0.6
NUP35Q8NFH5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AF238378.1-201ENST00000526806 358 ntBASIC11.29□□□□□ -0.6
NUP35Q8NFH5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AC012640.2-201ENST00000561606 901 ntBASIC11.29□□□□□ -0.6
NUP35Q8NFH5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AL358472.4-201ENST00000633140 710 ntBASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AC010507.1-201ENST00000633895 436 ntBASIC11.29□□□□□ -0.6
NUP35Q8NFH5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 RNPS1P1-201ENST00000507437 918 ntBASIC11.28□□□□□ -0.6
NUP35Q8NFH5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AC117500.6-201ENST00000624871 588 ntBASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 AL118506.1-201ENST00000601296 3082 ntBASIC11.28□□□□□ -0.6
NUP35Q8NFH5 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
NUP35Q8NFH5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms