Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 KRT8P22-201ENST00000562317 1415 ntBASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 CICP17-201ENST00000418553 2377 ntBASIC13.12□□□□□ -0.31
LRRTM1Q86UE6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 INE2-201ENST00000630399 1874 ntBASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 HLA-K-203ENST00000430151 1046 ntBASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 AL512361.1-201ENST00000554200 418 ntBASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 CICP8-201ENST00000455800 2813 ntBASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 KRT8P24-201ENST00000560290 1559 ntBASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRTM1Q86UE6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AL137783.1-201ENST00000623494 1896 ntBASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRTM1Q86UE6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms