Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 CICP23-201ENST00000605013 2741 ntBASIC20.61■□□□□ 0.89
CDCA8Q53HL2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 TUBB8P8-201ENST00000458717 1058 ntBASIC20.6■□□□□ 0.89
CDCA8Q53HL2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.6■□□□□ 0.89
CDCA8Q53HL2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 AC132192.2-201ENST00000596206 1147 ntBASIC20.6■□□□□ 0.89
CDCA8Q53HL2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 AL162426.1-201ENST00000624141 743 ntBASIC20.6■□□□□ 0.89
CDCA8Q53HL2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 AC011270.2-201ENST00000624293 2550 ntBASIC20.6■□□□□ 0.89
CDCA8Q53HL2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
CDCA8Q53HL2 AL136172.1-201ENST00000598590 1394 ntBASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AC020907.1-201ENST00000616460 1350 ntBASIC20.59■□□□□ 0.89
CDCA8Q53HL2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AC126915.1-201ENST00000522847 1038 ntBASIC20.59■□□□□ 0.89
CDCA8Q53HL2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AL118558.3-201ENST00000607414 1079 ntBASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AC007663.3-201ENST00000609632 465 ntBASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AC027601.3-201ENST00000622907 509 ntBASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
CDCA8Q53HL2 KRT8P29-201ENST00000420409 1371 ntBASIC20.59■□□□□ 0.89
CDCA8Q53HL2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms