Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
ATXN3P54252 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
ATXN3P54252 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.49■□□□□ 0.07
ATXN3P54252 EEF1DP4-201ENST00000446006 880 ntBASIC15.49■□□□□ 0.07
ATXN3P54252 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.49■□□□□ 0.07
ATXN3P54252 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.49■□□□□ 0.07
ATXN3P54252 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
ATXN3P54252 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.49■□□□□ 0.07
ATXN3P54252 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
ATXN3P54252 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.49■□□□□ 0.07
ATXN3P54252 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.49■□□□□ 0.07
ATXN3P54252 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.49■□□□□ 0.07
ATXN3P54252 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.49■□□□□ 0.07
ATXN3P54252 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.49■□□□□ 0.07
ATXN3P54252 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.49■□□□□ 0.07
ATXN3P54252 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.48■□□□□ 0.07
ATXN3P54252 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.48■□□□□ 0.07
ATXN3P54252 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.48■□□□□ 0.07
ATXN3P54252 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.48■□□□□ 0.07
ATXN3P54252 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 MIR326-201ENST00000362220 95 ntBASIC15.48■□□□□ 0.07
ATXN3P54252 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ATXN3P54252 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.48■□□□□ 0.07
ATXN3P54252 Z93015.1-201ENST00000451718 390 ntBASIC15.48■□□□□ 0.07
ATXN3P54252 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.48■□□□□ 0.07
ATXN3P54252 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.48■□□□□ 0.07
ATXN3P54252 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.48■□□□□ 0.07
ATXN3P54252 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.48■□□□□ 0.07
ATXN3P54252 RN7SL190P-201ENST00000582519 257 ntBASIC15.48■□□□□ 0.07
ATXN3P54252 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.48■□□□□ 0.07
ATXN3P54252 AC244452.3-201ENST00000636814 210 ntBASIC15.48■□□□□ 0.07
ATXN3P54252 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.48■□□□□ 0.07
ATXN3P54252 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ATXN3P54252 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.48■□□□□ 0.07
ATXN3P54252 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
ATXN3P54252 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.48■□□□□ 0.07
ATXN3P54252 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ATXN3P54252 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATXN3P54252 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 CICP23-201ENST00000605013 2741 ntBASIC15.47■□□□□ 0.07
ATXN3P54252 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATXN3P54252 AC074338.1-201ENST00000416825 156 ntBASIC15.47■□□□□ 0.07
ATXN3P54252 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.47■□□□□ 0.07
ATXN3P54252 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.47■□□□□ 0.07
ATXN3P54252 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms