Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 Z93015.1-201ENST00000451718 390 ntBASIC12.72□□□□□ -0.37
COL8A2P25067 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.72□□□□□ -0.37
COL8A2P25067 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.72□□□□□ -0.37
COL8A2P25067 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
COL8A2P25067 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.72□□□□□ -0.37
COL8A2P25067 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.72□□□□□ -0.37
COL8A2P25067 AL118558.3-201ENST00000607414 1079 ntBASIC12.72□□□□□ -0.37
COL8A2P25067 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.72□□□□□ -0.37
COL8A2P25067 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
COL8A2P25067 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
COL8A2P25067 AP000845.1-201ENST00000581677 2131 ntBASIC12.71□□□□□ -0.37
COL8A2P25067 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
COL8A2P25067 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
COL8A2P25067 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.71□□□□□ -0.37
COL8A2P25067 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
COL8A2P25067 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.71□□□□□ -0.37
COL8A2P25067 MESTP3-201ENST00000503460 968 ntBASIC12.71□□□□□ -0.37
COL8A2P25067 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
COL8A2P25067 FTLP10-202ENST00000505798 471 ntBASIC12.71□□□□□ -0.37
COL8A2P25067 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 RN7SL713P-201ENST00000582127 302 ntBASIC12.71□□□□□ -0.37
COL8A2P25067 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.71□□□□□ -0.37
COL8A2P25067 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.71□□□□□ -0.37
COL8A2P25067 AC138466.3-201ENST00000619983 221 ntBASIC12.71□□□□□ -0.37
COL8A2P25067 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
COL8A2P25067 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 AC006486.2-201ENST00000624246 2199 ntBASIC12.71□□□□□ -0.37
COL8A2P25067 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COL8A2P25067 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.71□□□□□ -0.38
COL8A2P25067 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
COL8A2P25067 AC015818.8-201ENST00000587907 1519 ntBASIC12.71□□□□□ -0.38
COL8A2P25067 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
COL8A2P25067 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
COL8A2P25067 AL009178.2-201ENST00000597278 2719 ntBASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms