Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GRK6P1-201ENST00000400595 1711 ntBASIC13.89□□□□□ -0.19
THBS1P07996 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS1P07996 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.89□□□□□ -0.19
THBS1P07996 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.89□□□□□ -0.19
THBS1P07996 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
THBS1P07996 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
THBS1P07996 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
THBS1P07996 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.89□□□□□ -0.19
THBS1P07996 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
THBS1P07996 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.88□□□□□ -0.19
THBS1P07996 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.88□□□□□ -0.19
THBS1P07996 ACKR1-201ENST00000368121 1240 ntBASIC13.88□□□□□ -0.19
THBS1P07996 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.88□□□□□ -0.19
THBS1P07996 TLE1P1-201ENST00000422965 589 ntBASIC13.88□□□□□ -0.19
THBS1P07996 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.88□□□□□ -0.19
THBS1P07996 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.88□□□□□ -0.19
THBS1P07996 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
THBS1P07996 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 TP53TG3HP-202ENST00000569755 579 ntBASIC13.88□□□□□ -0.19
THBS1P07996 AC060766.1-201ENST00000590824 627 ntBASIC13.88□□□□□ -0.19
THBS1P07996 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
THBS1P07996 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.88□□□□□ -0.19
THBS1P07996 AC004233.3-201ENST00000607794 1269 ntBASIC13.88□□□□□ -0.19
THBS1P07996 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 AL354702.1-201ENST00000442006 1960 ntBASIC13.88□□□□□ -0.19
THBS1P07996 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
THBS1P07996 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.88□□□□□ -0.19
THBS1P07996 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
THBS1P07996 AP001267.2-201ENST00000532619 2086 ntBASIC13.87□□□□□ -0.19
THBS1P07996 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 AC007541.1-201ENST00000570282 1469 ntBASIC13.87□□□□□ -0.19
THBS1P07996 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
THBS1P07996 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
THBS1P07996 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.87□□□□□ -0.19
THBS1P07996 ACTBP8-201ENST00000403258 1108 ntBASIC13.87□□□□□ -0.19
THBS1P07996 AC022447.6-201ENST00000515522 438 ntBASIC13.87□□□□□ -0.19
THBS1P07996 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.87□□□□□ -0.19
THBS1P07996 API5-211ENST00000534695 560 ntTSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.87□□□□□ -0.19
THBS1P07996 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.87□□□□□ -0.19
THBS1P07996 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.87□□□□□ -0.19
THBS1P07996 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.87□□□□□ -0.19
THBS1P07996 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
THBS1P07996 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms