Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.54■□□□□ 0.56
SMARCA5O60264 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCA5O60264 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCA5O60264 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SMARCA5O60264 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.54■□□□□ 0.56
SMARCA5O60264 AL355864.2-201ENST00000447420 863 ntBASIC18.54■□□□□ 0.56
SMARCA5O60264 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.54■□□□□ 0.56
SMARCA5O60264 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SMARCA5O60264 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SMARCA5O60264 AC025279.2-201ENST00000569730 653 ntBASIC18.54■□□□□ 0.56
SMARCA5O60264 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.54■□□□□ 0.56
SMARCA5O60264 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.54■□□□□ 0.56
SMARCA5O60264 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCA5O60264 AC233724.13-201ENST00000598383 410 ntBASIC18.54■□□□□ 0.56
SMARCA5O60264 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.54■□□□□ 0.56
SMARCA5O60264 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SMARCA5O60264 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.54■□□□□ 0.56
SMARCA5O60264 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SMARCA5O60264 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 RN7SKP230-201ENST00000365642 335 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 AC005229.1-201ENST00000392885 409 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 AL391280.1-201ENST00000506969 1062 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.53■□□□□ 0.56
SMARCA5O60264 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.53■□□□□ 0.56
SMARCA5O60264 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMARCA5O60264 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 ENPP7P14-201ENST00000621765 1040 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 AL358472.5-202ENST00000641448 1267 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SMARCA5O60264 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SMARCA5O60264 AL354702.1-201ENST00000442006 1960 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCA5O60264 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SMARCA5O60264 AC011840.2-201ENST00000563063 1520 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMARCA5O60264 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.53■□□□□ 0.56
SMARCA5O60264 SALL4P5-201ENST00000419001 1760 ntBASIC18.53■□□□□ 0.56
SMARCA5O60264 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SMARCA5O60264 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SMARCA5O60264 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.52■□□□□ 0.56
SMARCA5O60264 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCA5O60264 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCA5O60264 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SMARCA5O60264 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCA5O60264 FAM197Y7-201ENST00000432892 766 ntBASIC18.52■□□□□ 0.56
SMARCA5O60264 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.52■□□□□ 0.56
SMARCA5O60264 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms