Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.79□□□□□ -0.04
CDC7O00311 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC7O00311 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC7O00311 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.79□□□□□ -0.04
CDC7O00311 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC7O00311 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDC7O00311 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC7O00311 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC7O00311 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.79□□□□□ -0.04
CDC7O00311 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.79□□□□□ -0.04
CDC7O00311 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC7O00311 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC7O00311 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC7O00311 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDC7O00311 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.79□□□□□ -0.04
CDC7O00311 WFDC1-204ENST00000613603 549 ntBASIC14.79□□□□□ -0.04
CDC7O00311 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDC7O00311 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CDC7O00311 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC7O00311 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC7O00311 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDC7O00311 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC7O00311 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC7O00311 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC7O00311 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC7O00311 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CDC7O00311 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC7O00311 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 AL354702.1-201ENST00000442006 1960 ntBASIC14.78□□□□□ -0.04
CDC7O00311 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC7O00311 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.78□□□□□ -0.04
CDC7O00311 CLUHP6-201ENST00000580789 941 ntBASIC14.78□□□□□ -0.04
CDC7O00311 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.78□□□□□ -0.04
CDC7O00311 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC7O00311 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC7O00311 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC7O00311 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDC7O00311 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.77□□□□□ -0.04
CDC7O00311 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.77□□□□□ -0.04
CDC7O00311 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.77□□□□□ -0.04
CDC7O00311 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CDC7O00311 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CDC7O00311 OR2I1P-209ENST00000641730 5365 ntBASIC14.77□□□□□ -0.04
CDC7O00311 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms